Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 3e-23
 Identities = 100/416 (24%), Positives = 179/416 (43%), Gaps = 59/416 (14%)

Query: 125 EVSGTLFGTVFIGFDLS-YLEQQLAHARKW--TLLIVLGEMGLVALFSYLLGNALTRRLT 181
           ++ G   G ++ GF  S ++   L +  +    L++VL   GL+    Y    +L + + 
Sbjct: 315 DIRGERIGMIYTGFSESPFIHNYLLNIIELGTILMLVLLVSGLLV---YRGAYSLLQPIE 371

Query: 182 ELKTATDQITFGN--REVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWN 239
            +      +  G   R   L ++  +E++ +A  F +M+  L+   + ++    QLE   
Sbjct: 372 RIHHVVKAVQSGRNLRIGSLGLERDNELANLAEQFDRMLDLLQRRNSQIQAAAEQLEV-- 429

Query: 240 LELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNG 299
                KV +RT +L  K ++L+     L   + +LV  EK+ ++G L AG AHEINNP  
Sbjct: 430 -----KVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEINNPTA 484

Query: 300 ALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDAL 359
            +  +++LL+ +                                L +    +EE +   +
Sbjct: 485 VILGNMELLKSE--------------------------------LGDKAEDVEEEIDIVI 512

Query: 360 HCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIY 419
             V RI TI+  + +       +    +  L+ + + + I  +R  +  +E  L   L  
Sbjct: 513 EQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEEMAIL-VRHSIKKQEVVLIQDLNA 571

Query: 420 CYSNDF--VTALSAILNNAYQAYASDDPMIRIELSLRHDHQQ------LEIEVRDFGRGM 471
            Y  +      L  ++N    A  + D   RI +   +D  Q      ++IEV D G+G+
Sbjct: 572 SYPIEVNRPQLLQVLINLVVNAAHAMDGQGRIWIR-TYDWVQGGEPIGVKIEVEDEGKGI 630

Query: 472 SIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITL 527
             E+    FDPF+TT     G GLGL+ +Y  IK+  G I++ S + +GT   I L
Sbjct: 631 PEEQLGRIFDPFYTTRQ--DGTGLGLSLSYGIIKRIGGTIEVSSTVGKGTLFTIGL 684