Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 82.4 bits (202), Expect = 4e-20
 Identities = 103/399 (25%), Positives = 178/399 (44%), Gaps = 36/399 (9%)

Query: 132 GTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFS-YLLGNALTRRLTELKTATDQI 190
           GT+ +  DL  + ++L       LL    +  +VA F  +L+   +TR L +L   +  I
Sbjct: 130 GTLLVQADLRVVYEKLLDRAIVILLSNAIKTFIVAGFILFLVWYLVTRHLHKLSDYSQNI 189

Query: 191 TF-GNREVLLEIQG---HDEISRVAHSFQQMVQSLRHS----EATMRDYQHQLEQWNLEL 242
              G  E L+ ++    +DE   VA +  +M Q LR S    +A+  + Q  L      L
Sbjct: 190 NLEGEFEPLVFVKDSHKNDEFWLVAEAINKMQQQLRRSFDDIKASKLELQEALADRERLL 249

Query: 243 EDKVNQRTETLLAKNQQLEEMNTKLTLMK---DKLVETEKMISIGTLAAGFAHEINNPNG 299
           E + + + E      ++ +E+   L ++K     LVE EKM ++G L +G AHEIN P G
Sbjct: 250 ELERSYKDELARQVKERTQELEQSLLVLKRAQQVLVEQEKMAALGGLVSGVAHEINTPIG 309

Query: 300 ALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEE---SLR 356
                   L     QL +  E++           K   ++NA  LEE  + +EE   S  
Sbjct: 310 IC------LTAASTQL-IHIEELI----------KLIHSENAT-LEEINAILEEYQQSCE 351

Query: 357 DALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGL--REWVVWKEQTLY 414
             +  + R  +++ K +   AE +L D   ++    +E+  +       + +   E  + 
Sbjct: 352 LIISNITRASSLIQKFKTIAAEQSLEDKRSINLKQGLEEHHESMRFIYGDKLAEVEYRVD 411

Query: 415 PPL-IYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSI 473
           P L I    + F   ++ + +NAY          +I +    D   L+I ++D G G+  
Sbjct: 412 PDLNILTNLSLFKQIVTNLFSNAYAHGFKGRSQGKIRIDAEVDAGMLKICIQDDGPGIDS 471

Query: 474 EEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQ 512
           E   H F+PF+TT     G GLGL+ A++++    G+I+
Sbjct: 472 EATGHIFEPFYTTTRSEGGTGLGLSAAFNAVTLLQGNIR 510