Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 25/318 (7%)

Query: 217 MVQSLRHSEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVE 276
           ++Q L   ++ + D  +  + W L++    N +   LL       E +T+   ++    E
Sbjct: 354 VLQVLNEQKSLIADMMYLEQYWQLQIHPIANDQVVVLL-------EESTEQHKLRQANEE 406

Query: 277 TEKMISIGTLAAGFAHEINNPNGALKSHLQLLQ---QDFNQLKVGFEQIDILLSGSDFHG 333
             ++ S+G L+AG AHEINNP G +   + L     +D N     ++Q +     +    
Sbjct: 407 ASRLASLGELSAGIAHEINNPTGLILHAISLFSAAIKDLNPAANYYQQQNPFWQIAGLAP 466

Query: 334 KFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLV 393
                + A+    S   IEE+ +       RI  IV+ ++R        D + V    +V
Sbjct: 467 SQAMEEMAV----SSDTIEEAAK-------RISRIVNDLKRYALPNLTQDHTLVCLNEVV 515

Query: 394 EQAIQICG--LREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIEL 451
           E A+++     +   V K   L  P I   +      L  ++ NA  A A+ +  I+I  
Sbjct: 516 EVALRLTANQTKTRQVTKLLHLPSPRIMGDAQQLHQVLINLIQNACHACAAHEGSIQI-- 573

Query: 452 SLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDI 511
           S +    +  I+V D G GM     +   +PFFTT     G GLGL+     IK++ G +
Sbjct: 574 STQVSQGRALIKVNDNGCGMDSATLKRITEPFFTTRRTEGGSGLGLSVCSRIIKEHQGQM 633

Query: 512 QLFSELRQGTRVLITLPL 529
           Q+ S   +GTR+ ++  L
Sbjct: 634 QIHSAPGKGTRIQLSFAL 651