Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  100 bits (248), Expect = 3e-25
 Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 32/288 (11%)

Query: 259 QLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVG 318
           + + +N +L   + +L+++EKM SIG LAAG AHE+NNP G + S+L  L     ++   
Sbjct: 724 EAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYLREIFAI 783

Query: 319 FEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESL-------RDALHCVDRI-KTIVD 370
               +   SG     +  ++   L LE+ F  +   +       RD L  V +I + + D
Sbjct: 784 IAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKIARDLKD 843

Query: 371 KVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQ----TLYP-----PLIYCY 421
             +  +AE     S W      ++  + I       VW E     T++      PL++C 
Sbjct: 844 FSRAGEAE-----SQWADLHQGLDSTLNI-------VWNELKYKCTVHKEYGELPLVWCE 891

Query: 422 SNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFD 481
            +        +L NA QA       I +    R D  ++ + V D G G++ E     F+
Sbjct: 892 PSQINQVFMNLLVNAAQAIPKKGD-IWLRTGRRGD--EVFVAVSDSGCGIAPEYLHRLFE 948

Query: 482 PFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPL 529
           PFFTT  VGKG GLGL+ AYS ++K+ G +++ SE  +G+   + LP+
Sbjct: 949 PFFTTKPVGKGTGLGLSLAYSIVQKHQGRLEVESEPGRGSTFTVWLPI 996