Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  125 bits (315), Expect = 4e-33
 Identities = 105/319 (32%), Positives = 153/319 (47%), Gaps = 28/319 (8%)

Query: 234 QLEQWNLELEDKVNQRTET---LLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGF 290
           QL      LE+ V +R  +   L  +N +L E+N +L   +++LV++EKM SIG LAAG 
Sbjct: 422 QLSLAKQALEEDVRRREASENELRQRNAELLEVNKRLQEAQEQLVQSEKMASIGQLAAGV 481

Query: 291 AHEINNPNGALKSHLQLL-------QQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALY 343
           AHEINNP G ++S+L  L       Q   + L     Q+      +    +  Q  +  +
Sbjct: 482 AHEINNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLPSEHPAAQAVARVKQDLDFDF 541

Query: 344 LEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWV-------SPLSLVEQA 396
           L E    +    RD    +DR++ IV  ++      A  D  W        S L++V   
Sbjct: 542 LLEDLPSLVTQSRDG---IDRVRKIVADLKDFSRLDASQDWQWADLHQGLDSTLNIVNNE 598

Query: 397 IQICGLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHD 456
           I+    R  VV +   L  P + C  +        +L N+  A   +  M RI L   HD
Sbjct: 599 IKY---RAEVVREYGQL--PEVECLPSQLNQVFLNLLVNSAHAMP-EGQMGRITLRSGHD 652

Query: 457 H--QQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLF 514
               Q+ +EV D G G+S E     FDPFFTT  VGKG GLGL+ +Y  ++K+ G I + 
Sbjct: 653 EPAHQVWLEVEDNGSGISPENMHRLFDPFFTTKPVGKGTGLGLSLSYGIVQKHHGQITVS 712

Query: 515 SELRQGTRVLITLPLAPNK 533
           SEL +GT   I LP++  K
Sbjct: 713 SELGKGTTFRIVLPVSQPK 731