Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 82.0 bits (201), Expect = 4e-20
 Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 6/273 (2%)

Query: 258 QQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKV 317
           ++L + +  L   + +L+ +EKM S+G L AG AHE+NNP   +  ++  L++   +L+ 
Sbjct: 183 RELRQTHEDLKRTQQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKRYAGRLET 242

Query: 318 GFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQA 377
             E +     G D   +  + ++ L ++     +   +   +   +R + IVD ++R  A
Sbjct: 243 YLEAVHN--RGCDCIPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRFSA 300

Query: 378 EPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYCYSN--DFVTALSAILNN 435
                 +   +   +V++A++         +  +T  P  +    +       +  ++ N
Sbjct: 301 LDR-EAAERFNLAEVVQRAVRWVAKSAPPSFTVRTELPAELPLRGSPGQLQQVVMNLVQN 359

Query: 436 AYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGL 495
           A QA A+  P   + +S     ++L +   D G G+  E   H FDPFFTT  VG+G GL
Sbjct: 360 ALQATAAQ-PGGELLISGELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVGEGTGL 418

Query: 496 GLTEAYSSIKKYDGDIQLFSELRQGTRVLITLP 528
           GL+ +Y  ++++ G I   +    G    +TLP
Sbjct: 419 GLSISYGIVERHGGRIVASNHPEGGAVFRLTLP 451