Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 955 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 83.2 bits (204), Expect = 4e-20
 Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 29/281 (10%)

Query: 265 TKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDI 324
           T+   + D LV+TEKM+S+G LA G AHE+NNP GA+   +Q + +  +       Q   
Sbjct: 680 TERARLADMLVQTEKMLSVGGLAGGMAHELNNPLGAVLQGVQNIIRRLDPDMAANAQ--- 736

Query: 325 LLSGSDFHGKFTQTKNALYLE-ESFSGIEESLRDA-LHCVDRIKTIVDKVQRCQAEPALH 382
             +  D        ++  Y+E    S + E +RDA +   D I T+++  +     P   
Sbjct: 737 --AARDAGVSLVAMRS--YMEARRISEMLEGIRDAGVRAADIIATMLEFTR-----PGQG 787

Query: 383 DSSWVSPLSLVEQAIQICG----------LREWVVWKEQTLYPPLIYCYSNDFVTALSAI 432
             +     +L E+A+ + G           R+  V ++       + C   +    L  +
Sbjct: 788 RRTTARAHALAERALALAGSDYDLRRQYDFRKLHVVRDYAESADTLTCVPTEIEQVLLNL 847

Query: 433 LNNAYQAYASDD----PMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHD 488
             NA  A A  D        + +S R +  ++ I V D G GM  E ++  F+PFFTT  
Sbjct: 848 FKNAAHAMAEKDYPAGQTPALHVSTRREGDEVVIVVEDNGPGMEPEVRRRVFEPFFTTKP 907

Query: 489 VGKGVGLGLTEAY-SSIKKYDGDIQLFSELRQGTRVLITLP 528
            G G GLGL  +Y   ++ + G I       +G R  + LP
Sbjct: 908 PGVGTGLGLAVSYFIVVRTHGGSITCDGVPGEGARFTVRLP 948