Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 86/282 (30%), Positives = 129/282 (45%), Gaps = 40/282 (14%)

Query: 270 MKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQ----DFNQLKVGFEQIDIL 325
           +++ +V+TEKM+S+G LAAG AHEINNP G +    Q +Q+    DF    V  E+    
Sbjct: 501 IEEMMVQTEKMLSVGGLAAGMAHEINNPLGGILQGAQNIQRRLDPDFAPNVVAAEESGC- 559

Query: 326 LSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSS 385
            S     G   +     +LE    GI ES   A + V  +     +           +S 
Sbjct: 560 -SMDSIRGYLDRRGILRFLE----GIRESGNRAANIVSNMLEFSRR----------SESR 604

Query: 386 W--VSPLSLVEQAIQICG----------LREWVVWKEQTLYPPLIYCYSNDFVTALSAIL 433
           W  VS   LV++ +++             R   + ++     P + C   +    L  + 
Sbjct: 605 WQRVSLPYLVDRTLELAANDYDLKKKYDFRHIDIVRDFAADLPDLPCMPTEIEQVLLNLF 664

Query: 434 NNAYQAY-----ASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHD 488
            NA QA        D P  RI +SLRH+   L I+V D G GM  + ++  F+PFFTT  
Sbjct: 665 KNAAQAMHLRGDRPDPP--RISVSLRHEGGMLRIDVADNGPGMEEDVRRRVFEPFFTTKS 722

Query: 489 VGKGVGLGLTEAYSSI-KKYDGDIQLFSELRQGTRVLITLPL 529
           VG+G GLGL+ +Y  I   + G   + SE  +GT   + LP+
Sbjct: 723 VGEGTGLGLSVSYFIITTNHGGTFTVESEPGRGTVFTLRLPV 764



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 26/251 (10%)

Query: 9   LGVALIEALLLTILITFTLSYLESTN--YDGLQKRAQTTIALFATMVKNPVLAYDLASID 66
           L V+L+  +L+ +   F+  Y++ +      + ++A   I   A ++  P+  +D  ++D
Sbjct: 25  LTVSLVVMVLVVVAALFSFVYVQISRDMLHEVDRKADEYITRLADILSIPMWNFDARTMD 84

Query: 67  SAATLMMSNQDIVYVAVENPHGKLLTFKGNRDLFEAYHTINDQDFSKLQSIYPITDVIEV 126
              ++    + I  + +E+  G  L F+  +          D D +  +        +  
Sbjct: 85  QIGSVFAQYELINEIHIEDAQGNTL-FRVRKGA--------DPDATVFRE-----RAVRF 130

Query: 127 SGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFS--YLLGNALTRRLTELK 184
              + G V +   L    + L    K + LI +G + +V L S   LL   L R L  L+
Sbjct: 131 ESEVIGRVSMVVTLQEYRRSLERLLKASALI-MGSVLVVLLASTGVLLRVFLRRPLEALR 189

Query: 185 TATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNLELED 244
           +  DQI  G+    +    H E++++A +F +M   +   E       ++L   N +L+D
Sbjct: 190 SGMDQIARGDFAYDMGSIAHAELAQIAENFSRMCSQVEQRE-------NELHAINTKLQD 242

Query: 245 KVNQRTETLLA 255
           ++  R +T LA
Sbjct: 243 EIQSRRQTELA 253