Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 119/497 (23%), Positives = 193/497 (38%), Gaps = 112/497 (22%)

Query: 50  ATMVKNPVLAYDLASIDSA----------ATLMMSNQDIVYVAVENPHGKLLTFKGNRD- 98
           A +  N  +  DL  +D++          A +M  +  IVY  V +P G+++     R+ 
Sbjct: 52  AVLFTNARIYEDLGMVDTSGMSDYLDYFVADVMRLDTRIVYFMVFDPEGRVIAHNNLREY 111

Query: 99  ------------LFEAYHTINDQDFSKLQSIYPITDVIEVSGTLFGTVFIGFDLSYLEQQ 146
                       L   + T++ QD + L     I   + +    +G   IGF L  + + 
Sbjct: 112 GRRHTDETTRTALAATFPTVSRQDTANLGPHLDIAVPLSIGSKRWGVCRIGFSLREMYRS 171

Query: 147 LAHARKWTLLIVLGEMGLVALFS-YLLGNALTRRLTELKTATDQITFGNREV--LLEI-Q 202
           L   R+  +L +   + LVAL   +  G    R L  L    + IT        L ++ +
Sbjct: 172 LDALRR-EVLGISAVLLLVALAGVWYAGRHFARPLAALTRTMNDITARGDLAGPLPDLPR 230

Query: 203 GHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEE 262
             DEI  +  SF  M + LR +E                         E L A       
Sbjct: 231 RDDEIGTLQASFMWMTRRLRDAER------------------------ERLRAV------ 260

Query: 263 MNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQI 322
                    + + +TEK+ +IG LA+G AHEINNP G +    + L +         + I
Sbjct: 261 ---------EGMYQTEKLATIGQLASGVAHEINNPLGGVILCFRNLTEGGMDEATRRQHI 311

Query: 323 DILLSGSDFHGKFTQTKNAL--YLEESFSGIEESLRDALHCVDRIKTIVD-KVQRCQAEP 379
           +++  G +   K  +    L  Y   +   + E+  D L  +DR   +VD  +QR +   
Sbjct: 312 EVIDDGLE---KIRRIVRELMHYARPAPLSVREARADDL--IDRTLALVDYTLQRRRINV 366

Query: 380 ALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQA 439
             H S  V PL++    +             Q L               L+ +LN A   
Sbjct: 367 VRHVSPDVPPLAIDPDKMG------------QVL---------------LNLVLNGA--- 396

Query: 440 YASDDPMI---RIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLG 496
               D M     + ++ R     + IEV+D G G++ E ++  FDPFFTT   G G GLG
Sbjct: 397 ----DAMPDGGTLTITARRAGDDVRIEVQDTGSGVAEEHRERIFDPFFTTKPAGSGTGLG 452

Query: 497 LTEAYSSIKKYDGDIQL 513
           L  + S + ++ G + L
Sbjct: 453 LAVSASIVMRHGGTLTL 469