Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 80/280 (28%), Positives = 121/280 (43%), Gaps = 34/280 (12%)

Query: 270 MKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQI--DILLS 327
           M+  +++TEKM+S+G LAAG AHEINNP   +      +Q+           I  +I L 
Sbjct: 289 MESLMLQTEKMLSLGGLAAGMAHEINNPLAVILQGADTVQRRLAPGLPANRDIAREIGLD 348

Query: 328 GSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIV--DKVQRCQAEPALHDSS 385
               H    + K    L    +GI E+ R A   V+ + +    D+ +RC          
Sbjct: 349 LDLMHTYLERRK----LPRFIAGIAEAGRRAADIVENMLSFGRGDEGRRCA--------- 395

Query: 386 WVSPLSLVEQAIQICG----------LREWVVWKEQTLYPPLIYCYSNDFVTALSAILNN 435
            +    +VE+A+++             R+ ++ K+     P I C   +    L  +L N
Sbjct: 396 -IDINKVVERALELAAHHYDLKKKYDFRQILIVKDLAEGMPSIVCNPIEMEQVLFNLLQN 454

Query: 436 AYQAYASDDPMIR---IELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKG 492
           A Q      P      I L  R   + LEI V D G G+  E  +  F+PFFTT   G G
Sbjct: 455 AAQVLYEAPPQDARPTIHLQTRCVGRLLEIRVTDNGPGVPHELARRIFEPFFTTKPPGMG 514

Query: 493 VGLGLTEAYSSIKKYDGDIQLFSELR---QGTRVLITLPL 529
            GLGL+ +Y  + ++ G       LR    G R ++ LPL
Sbjct: 515 TGLGLSVSYFIVSEHHGGTLRLERLRLPEHGARFIVELPL 554