Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 85/383 (22%), Positives = 168/383 (43%), Gaps = 32/383 (8%)

Query: 164 LVALFSYLLGNALTRRLTELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSLRH 223
           L A+ S L+G  +  R+ +     + +T    E  L++   D    +A    +++ +L H
Sbjct: 341 LEAMPSALVGFDVQGRVVQWNRVAESMTGVAAEDALDMPARDATRLLAGDDPRLLLALEH 400

Query: 224 SEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMN--TKLTLMKDKLVETEKMI 281
                 D   +L  +  +    V+ +T T    +  +  ++  T+   +++ L+++EKM+
Sbjct: 401 RTP---DTFSRLSVYRDDGMHHVDVQTFTAGVADVLVMRVDDVTRRVRLEEALLQSEKML 457

Query: 282 SIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNA 341
           SIG LAAG AHE+NNP GA+    Q +Q+  +             +  + H      ++ 
Sbjct: 458 SIGGLAAGMAHEMNNPLGAILQGAQNIQRRLDPALPANRA-----AAEEAHCPLDAMQSY 512

Query: 342 LYLEESFSGIEESLRDA-LHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQIC 400
           + +     G  + +++A       +  +++ ++  Q E        +   +++++A+ + 
Sbjct: 513 M-VARGIPGFLDGIQNAGARAASLVAHMLEFIRPSQGERTA-----IGLTTIIDRALALA 566

Query: 401 G----------LREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYAS----DDPM 446
           G           R   + ++      +I C   +       +  NA QA       +   
Sbjct: 567 GNDYSDNMNHDFRTLGIVRDYDPTDDIISCIPAELEQVFLNLFRNAAQAMRDKTYPEGIS 626

Query: 447 IRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSI-K 505
             + +  R    ++ ++V D G G+S   ++  F+PFF+T D GKGVG+GL  AY  I  
Sbjct: 627 PELHIVTRVLPSEVRVDVIDNGPGISPAVRKRIFEPFFSTRDAGKGVGMGLAIAYFIITT 686

Query: 506 KYDGDIQLFSELRQGTRVLITLP 528
            + G I+  S   +GTR+ I LP
Sbjct: 687 NHGGTIECASRPGEGTRLTIRLP 709