Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 83/280 (29%), Positives = 124/280 (44%), Gaps = 35/280 (12%)

Query: 259 QLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVG 318
           +L++ + K  ++  + +++ KM ++G LAAG AHE+NNP       L L++++   +K  
Sbjct: 303 KLKDSDRKQAMLDAEFLQSSKMAALGKLAAGVAHEVNNP-------LMLIRENAGWIK-- 353

Query: 319 FEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRC--Q 376
               D+L+            +N   L  +   IE      +H VDR K +  ++     +
Sbjct: 354 ----DLLVEEDP-----AAMRNHKELVTAADKIE------MH-VDRAKGVTHRMLGLARR 397

Query: 377 AEPALHDSSWVSPLSLVEQAIQICGL----REWVVWKEQTLYPPLIYCYSNDFVTALSAI 432
            EP   D   V    L EQ I+        R   + KE     P I   +      L  I
Sbjct: 398 LEPLQDD---VCVNLLTEQTIKFLETEALHRHITLVKELADDLPPITTDATQVQQVLLNI 454

Query: 433 LNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKG 492
           L+NA  A   D   I I      D  ++ + V D G G+  E     FDPF+TT  VG+G
Sbjct: 455 LDNAIDAVGRDGT-ITIRTGAAPDRSEVFVSVSDTGEGIPPELLSRIFDPFYTTKKVGEG 513

Query: 493 VGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPLAPN 532
            GLGL   +S ++K  G I   S   QG    +TLPLA N
Sbjct: 514 TGLGLAICHSILEKLGGRIHAASAPGQGATFTVTLPLAAN 553