Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 72.0 bits (175), Expect = 6e-17
 Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 43/269 (15%)

Query: 265 TKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDI 324
           T++  ++  L E EK+ ++GTLAAG AHEI NP  AL+   Q   +              
Sbjct: 333 TQIRELEKNLSEAEKLAALGTLAAGVAHEIRNPLSALRGFAQYFAKK------------- 379

Query: 325 LLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDS 384
            L G      + QT                +R+A    DR+  ++  +    + P   D+
Sbjct: 380 -LVGRQPDETYAQTM---------------VREA----DRLNRVITDLLYL-SRPRAMDA 418

Query: 385 SWVSPLSLVEQAIQIC--GLREWVVWKEQTLYPPLIYCYSNDFVTA-LSAILNN--AYQA 439
             VS   LV     +    L +  +  + +L P +++   +    A L+ +LN+  A + 
Sbjct: 419 RAVSLGQLVADIGNLVRFDLEKRNIALKVSLGPDIVWADEDALKQAVLNLVLNSIDALEG 478

Query: 440 YASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTE 499
            A+ +  I +  S         + V D G GMS  +++ AF+PFFTT    KG GLGL  
Sbjct: 479 LATGEREIHV--SSAQGDGGTWVFVGDSGPGMSALQREQAFEPFFTTKK--KGTGLGLAL 534

Query: 500 AYSSIKKYDGDIQLFSELRQGTRVLITLP 528
            + +++++DG  Q+ SE+ +GT V +  P
Sbjct: 535 VHKTMREHDGRAQIDSEMGRGTTVSLFFP 563