Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1085 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 42/321 (13%)

Query: 224  SEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISI 283
            +E  +R  + +L++ N  LE +V  RTE L    + + +               +KM S+
Sbjct: 788  AEEKLRHSEERLKELNESLESQVRLRTEELERSFESVRQ--------------ADKMASL 833

Query: 284  GTLAAGFAHEINNPNGALKSHLQLLQQDFNQ----LKVGFEQIDILLSGSDFHGKFTQTK 339
            G L AG AHEINNP+  ++ ++ LLQ  ++     L    ++ D+ ++G  F        
Sbjct: 834  GILVAGVAHEINNPSSFIRMNIGLLQSIWDDSIHILDRESKKEDLWIAGMPFD------- 886

Query: 340  NALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQI 399
               Y  +S   I + LR      +R+ TI+  ++    +  L  S  V     V  A+++
Sbjct: 887  ---YARKS---IPKLLRGIHQGAERVSTIICNLKDYARQVPLDMSGSVDLNKAVHSALEL 940

Query: 400  C------GLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSL 453
                        VV  E  L  P            L  ++ NAYQA  +    I +  + 
Sbjct: 941  LTTPLRKATNRLVVETEDGL--PAFRGDQRRIEQILVNLIQNAYQALQNRRQGIHMR-TY 997

Query: 454  RHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQL 513
            R D      E+ D G G++ E+  H  DPF+TT     G GLGL+ +   IK++ G++Q 
Sbjct: 998  RADGTVC-FEIVDEGHGITQEQLTHICDPFYTTKRDQGGTGLGLSVSAGIIKEHGGNMQF 1056

Query: 514  FSELRQGTRVLITLPLAPNKP 534
             SE  +GT V +    AP +P
Sbjct: 1057 SSEPGRGTTVTLRFQ-APERP 1076