Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., SEED: integral membrane sensor signal transduction histidine kinase from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.8 bits (216), Expect = 8e-22
 Identities = 92/392 (23%), Positives = 154/392 (39%), Gaps = 91/392 (23%)

Query: 140 LSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTRRLTELKTATDQITFGNREVLL 199
           +S L+QQL       L+ +LG + +   FS+L+G  L    T ++ AT  I  G+ + L 
Sbjct: 176 VSKLKQQL-------LISILGFLAVAVFFSWLVGRRLLGAFTLIENATRGIVQGDFKPLP 228

Query: 200 EIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQ 259
                DE   V  +   M++                     ELE++ NQ           
Sbjct: 229 LPDSRDESRSVVKALNHMIE---------------------ELENRQNQ----------- 256

Query: 260 LEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGF 319
                         LV+ +K+ S+G L +G AH++NNP   + +  Q+LQ+D        
Sbjct: 257 --------------LVQEKKLASLGVLTSGIAHQLNNPLNNISTSCQILQEDIGS----- 297

Query: 320 EQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEP 379
                    ++ H +  +  +               ++ L   D +K +++  +      
Sbjct: 298 -------GDAELHARMLRNIH---------------QEVLRSRDIVKGLLEFARE----- 330

Query: 380 ALHDSSWVSP--LSLVEQAIQICGLREWVVWKEQTLYPP--LIYCYSNDFVTALSAILNN 435
              D S V      +VE+A+ +               PP  ++   +     AL  +L N
Sbjct: 331 --KDFSLVPQRLADVVERAVSLVSSEVPAGVTLSASVPPDMVVPLDAQHMQEALINLLIN 388

Query: 436 AYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGL 495
           A QA  +    I +  +       + + V D G G+  E     FDPFFT   VGKG GL
Sbjct: 389 AIQAIPAPPGTITVSATRVPGRDMVALRVEDTGTGIPPEHLGRIFDPFFTLKAVGKGTGL 448

Query: 496 GLTEAYSSIKKYDGDIQLFSELRQGTRVLITL 527
           GL+  +  +KK+ G + + SE  +GT  +I L
Sbjct: 449 GLSIVFGVVKKHGGRVTVESEPGKGTAFIIHL 480