Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., GAF sensor signal transduction histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 88/310 (28%), Positives = 141/310 (45%), Gaps = 38/310 (12%)

Query: 230 DYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAG 289
           DYQHQL+  N +LE +V QRT       Q+LE   + L  ++  LVE EKM ++G+L AG
Sbjct: 169 DYQHQLKAINADLEVQVEQRT-------QELETALSDLRSIQHHLVENEKMAALGSLVAG 221

Query: 290 FAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFS 349
            AHE+N P G   + +     +   LK  FEQ ++     D    F  T     +++   
Sbjct: 222 VAHEVNTPLGIAVTSVTHCLDEVALLKTAFEQNEL---DEDKFLSFINT-----MQDGLG 273

Query: 350 GIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWK 409
            IE +L        R   +V   +R  A+ ++ +    +  + + Q      LR  +  K
Sbjct: 274 LIERNL-------SRAAELVHNFKRTAADQSVLERERFNLKTYIFQIFS--SLRPLMRKK 324

Query: 410 EQTLYPPL-----IYCYSNDFVTALSAILNNAY-----QAYASDDPMIRIELSLRHDHQQ 459
              L   L     I  Y        + ++ N++     +++  D     I + ++     
Sbjct: 325 NIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHGFPESFTGDK---SITIRVQKQDSN 381

Query: 460 LEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSI-KKYDGDIQLFSELR 518
           + ++ +D G GMS E K  AF+PFFTT     G GLG++  Y+ + +K  G I L S   
Sbjct: 382 ICMQYQDNGVGMSDEVKLKAFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGTILLASSPD 441

Query: 519 QGTRVLITLP 528
           QG +V I +P
Sbjct: 442 QGVKVEIQIP 451