Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., Response regulator containing a CheY-like receiver domain and an HD-GYP domain from Pseudomonas stutzeri RCH2

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 86/383 (22%), Positives = 159/383 (41%), Gaps = 51/383 (13%)

Query: 13  VLLLDDENDILKALNRVLRMD--YNVVTFDNGADALEYLQENPIHIIISDMRMPEMDGAD 70
           V+++DD    L+ L   +R      ++ F + A  L +LQ+N   +++ D+ MP  +G D
Sbjct: 11  VVVIDDITASLRLLESSVRAIGVQRIMAFSDSAAGLAWLQQNDWDLLLLDVDMPAPNGFD 70

Query: 71  FLAKAREMQPDTVRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKAAEFYR 130
            L      + + + ++++  +D +S   ++  G  + +ISKP D   L L V        
Sbjct: 71  ILRSLSGREHNRMVVMVSALSDRESRCSSLKLGA-NDFISKPLDLPELLLRV-------- 121

Query: 131 LSRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKVQERTVALQESNKRLES 190
                 R  ++L   +K+L++  + L              E KV ERT  L         
Sbjct: 122 ------RNQLQLSWASKQLKIERETL--------------ERKVCERTEQL--------- 152

Query: 191 LLASRNKTFKDILAMVTAIIQHRTGFPADHAERIANQAKSVALKLKLSEAVASHVYLCGL 250
                N +++ ++  ++   Q++      H  RI   A  +A  L         + L   
Sbjct: 153 -----NASYQSVICSLSRAAQYKDDETGQHIIRIGESAALIAAALGQPAEWVERIRLAAP 207

Query: 251 MHQIGLIAETSNDWKVVKVHQDSEIPITPNVNPILGAEIVGRIKRFEPLME----IIRHQ 306
           MH +G I    +         D E  I      I     + R     PL+E    I  + 
Sbjct: 208 MHDVGKIGIPDHILLKPGTLTDLERKIMQRHTQI--GHAILRDGEESPLLEMAAEIALYH 265

Query: 307 DELYDGTGKPDHLRGEQIPIGARIIKVVKDYDFFVAGANNPRRMHTKSAQGYLRQQSEVY 366
            E +DGTG P  L+GE+IP+ AR++ +   YD   +          + AQ Y+ +Q+ +Y
Sbjct: 266 HERWDGTGYPHGLKGEEIPLAARVVALCDVYDALRSPRPYKESWSKERAQAYICEQAGLY 325

Query: 367 YDPKVVEAFITIVSAVTRIEEGM 389
           +DP +V+    +   +  +++ +
Sbjct: 326 FDPALVDVLNGMFQQIEDMQDSL 348