Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  107 bits (268), Expect = 1e-27
 Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 13  VLLLDDENDILKALNRVLRMD-YNVVTFDNGADALEYLQENPIHIIISDMRMPEMDGADF 71
           +LL+DDE  IL AL R+ R + Y ++T ++G + L+ L  + + +IISD RMPEMDGA+F
Sbjct: 747 LLLVDDEPGILSALKRLFRREGYVILTANSGKEGLDILAGHDVGVIISDARMPEMDGAEF 806

Query: 72  LAKAREMQPDTVRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKAAEFYRL 131
           L K R M PDT+R++L+GY D+++   AVN G +  +++KPWD+  L   +  A   Y +
Sbjct: 807 LGKVRAMYPDTMRIILSGYTDLKAVTSAVNRGELFKFLTKPWDDGELLETIRDAFRQYEM 866

Query: 132 SR 133
            +
Sbjct: 867 RK 868



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 6   MHDEKLNVLLLDDENDILKALNRVLRMDYNVVTFDNGADALEYLQENPI-HIIISDMRMP 64
           +H E   VL++DD  + L  +  +L   YNV   ++G  AL+     P+  +I+ D+ MP
Sbjct: 14  LHQE--TVLVVDDTKENLTVIGELLNPHYNVRIANSGQRALKVANSTPVPDLILLDIMMP 71

Query: 65  EMDGADFLAKAREMQPDT--VRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIV 122
           EMDG + LA+ R   P T  + ++     D         A G   YI+KP       +++
Sbjct: 72  EMDGYETLAELR-ANPATRHIPVIFVTALDADEDEERGLALGAVDYIAKP---IRPAILL 127

Query: 123 GKAAEFYRLSRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKV 174
           G+     R   D +    +L  +N  LE   Q     N  + +  Q  EA++
Sbjct: 128 GR----IRTQLDLKLAQDQLRRQNASLEAEVQRRVAENLAIQEQGQRNEARL 175