Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 99/394 (25%), Positives = 158/394 (40%), Gaps = 70/394 (17%)

Query: 13  VLLLDDENDILKALNRVLRMDYNVVTFDNGADALEYLQENPI-HIIISDMRMPEMDGADF 71
           VL++DD  D ++ L+ +L   Y++    +GA AL      P+  +I+ D+ MPEMDG   
Sbjct: 10  VLVVDDSADNIQILHGLLSDKYSIRAATSGAKALALAAIEPMPDLILLDVMMPEMDGFQT 69

Query: 72  LAKAREMQPDTVRL---LLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKAAEF 128
             + +   P T  +    +T   DI         G +  YISKP     L+         
Sbjct: 70  CIRLKH-NPLTRHIPIIFVTAKTDIVDERTGFELGAVD-YISKPVKPAILE--------- 118

Query: 129 YRLSRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKVQERTVALQESNKRL 188
              +R K  LT                       LA    +LE+ VQ RT  L+ +  ++
Sbjct: 119 ---ARVKTHLT-----------------------LASRANQLESLVQLRTQELESARYKI 152

Query: 189 ESLLASRNKTFKDILAMVTAIIQHRTGFPADHAERIANQAKSVALKLKLSEAVASHVYLC 248
              L  R   F+D          + TG    H  R++     +A K+             
Sbjct: 153 IHKLG-RAAEFRD----------NETGL---HIIRMSQYGYLLARKIDQPAHWCQLFLSA 198

Query: 249 GLMHQIGLIAETSNDWKVVKVHQ-DSEIPITPNVNPILGAEIVGRIKRFEPLM----EII 303
             MH IG I     D  ++K  +  +E  I    +P +GA+I+G     +PL+    EI 
Sbjct: 199 APMHDIGKIGIP--DAVLLKPGKLTAEEYIIIQTHPAIGAKIIGDDD--DPLLVMAKEIA 254

Query: 304 RHQDELYDGTGKPDHLRGEQIPIGARIIKVVKDYDFFVAGANNPRRMHTKSAQGYLRQQS 363
            +  E +DGTG P+ L  +QIP+ ARI  +   +D                A  YLR  +
Sbjct: 255 LYHHERWDGTGYPNGLSQDQIPLCARIATIADVFDALTTPRTYKTAWSIDDAFNYLRDGA 314

Query: 364 EVYYDPKVVEAFITIVSAVTRIEEGMELCVSLSE 397
              +DP +V AF+   + +      +++C   +E
Sbjct: 315 GSQFDPLLVTAFLECKAEI------IDICTQFAE 342