Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  209 bits (533), Expect = 1e-58
 Identities = 135/429 (31%), Positives = 222/429 (51%), Gaps = 24/429 (5%)

Query: 13  VLLLDDENDILKALNRV-LRMDYNVVTFDNGADALEYLQENPIHIIISDMRMPEMDGADF 71
           +L +DDE  ILK+L R+ +  D  ++  D+G+ ALE + E+ +++II+DMRMP M GA+F
Sbjct: 12  ILCVDDEASILKSLQRLFIGKDLQILLADSGSKALELMLEHRVNVIITDMRMPNMTGAEF 71

Query: 72  LAKAREMQPDTVRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKAAEFYRL 131
           LAKA  +QPD  R+L+TGYAD+ STV A+N G IH Y+ KPWDN+ L  +V +      L
Sbjct: 72  LAKAAILQPDAYRILMTGYADLASTVSAINLGKIHRYVQKPWDNQELLTVVDEGLALCHL 131

Query: 132 SRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKVQERTVALQESNKRLESL 191
            R  ++LT ++  +NK+L+              + N  LE  V +RT  L+++  + + L
Sbjct: 132 IRQNKQLTAKVATQNKQLK--------------ELNSSLEETVLKRTEQLKQTLLKFKHL 177

Query: 192 LASRNKTFKDILAMVTAIIQHRTGFPADHAERIANQAKSVALKLKLSEAVASHVYLCGLM 251
              R K     L ++  II        + A +I+   + +A  LKL   + + V   GL 
Sbjct: 178 AGERQKDEAATLEVLYNIIVSYPPLSGELARKISATCEYLAKALKLPSELVNTVTKAGLF 237

Query: 252 HQIGLIAETSNDWKVVKVHQDSEIPITPNVNPILGAEIVGRIKRFEPLMEIIRHQDELYD 311
            +IG IA  +   +       +      N +P+   EI+   +    +  II +Q E Y+
Sbjct: 238 SEIGKIALPTKIAETAYTDLYNRERRLFNEHPLHAEEILLPAQHLSEMSLIIANQLERYN 297

Query: 312 GTGKPDHLRGEQIPIGARIIKVVKDYDFFVAGANNPRRMHTKSAQGYLRQQSEVYYDPKV 371
           G G+P    G  IP+G+RI+ V +D+   V G  +  +M    A   ++     YYDP +
Sbjct: 298 GGGEPAQKAGNDIPLGSRILAVARDFWLHVEGRYDGNKMSMIDAFDAIQLHQGSYYDPTI 357

Query: 372 VEAFITIVSA-----VTRIEEGMELCVSLSEVRPGMVIKRDIYLPNGNLMLTAGNAMSEP 426
           V A   +V++       R   G+E    +S ++ GM +K+++Y     L+L  G+ ++  
Sbjct: 358 VNALSILVASEDADIANRARRGLE----VSALKAGMKLKQNLYNLKHILLLPEGHVLTPA 413

Query: 427 LLRKLKELE 435
            L KL + +
Sbjct: 414 SLEKLSKYQ 422