Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 83/395 (21%)

Query: 9   EKLNVLLLDDENDILKALNRVLRMDYNVVTFDNGADALEYLQENPIHIIISDMRMPEMDG 68
           +K  +L++DD  + +  L  +L  DY V    +G  AL  + +    +I+ D+ MP M+G
Sbjct: 3   DKATILVVDDTPENIDILVGILGEDYKVKVAIDGPRALALVTKTLPDLILLDVMMPGMNG 62

Query: 69  ADFLAKAREMQPDTVRL---LLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKA 125
            + + K  + +P T  +    +T  +++    +    G +  YI+KP     +K  V   
Sbjct: 63  YE-VCKLLKQEPLTCHIPVIFVTALSEVADEAQGFALGAVD-YITKPVSAPVVKARVKTH 120

Query: 126 AEFYRLSRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKVQERTVALQESN 185
              Y    D++RL                               LE +V+ERT  L+E+ 
Sbjct: 121 LALY----DQKRL-------------------------------LEQQVKERTQELEETR 145

Query: 186 KRLESLLASRNKTFKDILAMVTAIIQHRTGFPADHAERIANQAKSVALKLKLSEAVASHV 245
             +   L  R   +KD          + TG    H  R+++ A+ +A+KL L       +
Sbjct: 146 FEIIRRLG-RAAEYKD----------NETGL---HVVRMSHYARLLAIKLGLPSTFCELL 191

Query: 246 YLCGLMHQIGLIAET-----------SNDWKVVKVHQDSEIPITPNVNPILGAEIVGRIK 294
           Y    MH IG I              + +WK+++ H             ++GAEI+G  +
Sbjct: 192 YNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQQHA------------VIGAEIIG--E 237

Query: 295 RFEPLMEIIRH----QDELYDGTGKPDHLRGEQIPIGARIIKVVKDYDFFVAGANNPRRM 350
             +PL+++ R       E +DGTG P+ L  E IPI  RI+ +   +D   +     +  
Sbjct: 238 HGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFDALTSQRPYKQPW 297

Query: 351 HTKSAQGYLRQQSEVYYDPKVVEAFITIVSAVTRI 385
             ++    L  Q+  ++DPK+VE F  I+  V  I
Sbjct: 298 TIEATMELLENQAGQHFDPKLVEEFKQILPEVIAI 332