Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 12  NVLLLDDENDILKALNRVL-RMDYNVVTFDNGADALEYLQENPIHIIISDMRMPEMDGAD 70
           ++LL++DE  +   +   L R  Y V   D    A   L   P  ++I+D+R+P M G +
Sbjct: 5   SILLVEDELSMRLGMQHALSRAGYEVAAADTAEAARHALHRRPFDLVITDLRLPGMSGME 64

Query: 71  FLAKAREMQPDTVRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLIVGKAAEFYR 130
            L   REM P T  +L+T + +++  V+A+ AG    ++ KP+ ++ L + V +   F  
Sbjct: 65  LLDSIREMHPGTGVILITAFPEVELAVQAIKAGAF-DFLCKPFQSDGLLIAVERFFRFLD 123

Query: 131 LSRDKERLTIELEE 144
           L R+ +RL  E EE
Sbjct: 124 LKRENDRLRGEREE 137



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 12/50 (24%), Positives = 27/50 (54%)

Query: 324 IPIGARIIKVVKDYDFFVAGANNPRRMHTKSAQGYLRQQSEVYYDPKVVE 373
           +P+ A++++V++D +    G N PR+++ ++     R   E   D +  E
Sbjct: 246 LPLQAKLLRVLEDQEVTPVGGNTPRKVNVRTVFATARNLEEAIADGRFRE 295