Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (281), Expect = 3e-29
 Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 3/233 (1%)

Query: 299 YQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTE-VMVRDILTFL 357
           YQP+ ++D G +V  EAL R   G+     P  F P+ E+  LI  L   V+ R +    
Sbjct: 313 YQPRLNLDGGHIVGLEALVRWRHGERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQ 372

Query: 358 MTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVEITEHDLIADFD 417
              +  L  + + VN+  +   D      L  +  E+  +     L  E+TE  ++   +
Sbjct: 373 ALRERGLAPLHMAVNLSFRQFQDSQLLPTLSRLIAERGVE--AQWLEFELTETAVMRRSE 430

Query: 418 AAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVILQ 477
             K  +  L  LG+R +LDDFGTG+S + +L  +P  ++KID  ++  + + E +  ++ 
Sbjct: 431 LVKQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPIALLKIDKSFVGGMEQREENRKLVH 490

Query: 478 SMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYL 530
           +MI+   +L+++V+AE V++ +Q  +L+  GCD VQG+L+S  +   +++ YL
Sbjct: 491 AMINLAHNLNLEVVAEGVETQEQLDLLRGFGCDQVQGFLISKPLPLPELVEYL 543