Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (286), Expect = 1e-29
 Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 4/256 (1%)

Query: 277 TLEIKQLLNIYRD-LQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPI 335
           TLE  QL N  R  L+      FYQP+  + +G + A EAL R          P  F  +
Sbjct: 686 TLERLQLENQLRKALEEQQLKVFYQPKLCLATGRLNAAEALVRWDHPAMGRVPPGDFIGL 745

Query: 336 LEKYHLIPTLTEVMVRDILTFLMT-EDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEK 394
            E+  LI  + E ++R         +   L  I + VN+    L  G    L+  V EE 
Sbjct: 746 AEETGLIGPIGEFVLRQACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEET 805

Query: 395 QAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFD 454
               A   L +E+TE  L+   +       +L+ LG++ A+DDFGTGYS   YL  IP D
Sbjct: 806 GL--APQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVD 863

Query: 455 VVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQG 514
            VKID  +I+ LG+      I +++I+    LS++V+AE V+  +Q + L+   CD VQG
Sbjct: 864 YVKIDQAFIRGLGEGSVDAAITRAIIAMAHGLSLKVVAEGVERQEQLEFLRSERCDEVQG 923

Query: 515 YLVSPAISPQQVLNYL 530
           YLVS  +  + +   L
Sbjct: 924 YLVSRPVEAEGLAGLL 939