Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (279), Expect = 7e-29
 Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 7/241 (2%)

Query: 295 FCAFYQPQKHIDSGGVVAFEALAR-RVIGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDI 353
           F   +QP+  +D   +VA EAL R +   +GL   PD F P+ E+  LI  L+  ++R+ 
Sbjct: 617 FVLHFQPRYTVDGREIVAVEALVRWQHPTQGLLS-PDAFIPLAEQTDLIVPLSRWVLREA 675

Query: 354 LTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVEITEHDLI 413
               +T      ++ + VN+             +  V  E   +    RL +EITE+ ++
Sbjct: 676 CETALTWPG---ELMVSVNLSPAQFERSDVVEDVRQVLIE--TRFPASRLELEITENVML 730

Query: 414 ADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESST 473
            D D A   +  LK LG+R  +DDFGTGYS   YL   PFD +KID R+I S+  + +  
Sbjct: 731 NDVDGALQVMNALKELGVRLNMDDFGTGYSSLGYLRTYPFDGIKIDKRFIASMSNSSNDR 790

Query: 474 VILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYLHNK 533
            ++Q++I+  K++ + V AE V++  Q   L    C  VQGY +S  I  Q     L + 
Sbjct: 791 AVVQAIINLGKAMGLTVTAEGVETLAQLGSLGSDQCHEVQGYFLSRPIDKQAFARLLESG 850

Query: 534 L 534
           L
Sbjct: 851 L 851