Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  111 bits (278), Expect = 6e-29
 Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 3/244 (1%)

Query: 288 RDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTE 347
           R L+ G     YQP+  ++SG +V  EAL R +  +     PD F P+ E+  LI  L  
Sbjct: 300 RALRRGELELHYQPRLCLESGRIVGLEALVRWLHPERGLLAPDAFIPMAEESGLIVPLGY 359

Query: 348 -VMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVE 406
            V+ R +      +D     + + +N+  +   D      L  + +E+      H L  E
Sbjct: 360 WVIARALRDLQSLQDGGADALHMAINLSFRQFQDSQLLPTLNRLIDERGIDP--HWLEFE 417

Query: 407 ITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSL 466
           +TE  ++   D  +  +  L  LG+R +LDDFGTG+S + +L  +P  ++KID  ++  +
Sbjct: 418 LTETAVMRRSDQVQSAMNALGELGVRFSLDDFGTGFSSFVHLSSLPITLLKIDKSFVAGM 477

Query: 467 GKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQV 526
                   ++Q+M+    +L ++V+AE V++ +Q ++L++ G   VQGYLVS  +   ++
Sbjct: 478 ILRPEKLQLVQAMVGLAHNLDLEVVAEGVETAEQLELLRQFGAQQVQGYLVSQPLPLAEL 537

Query: 527 LNYL 530
           ++++
Sbjct: 538 VSFM 541