Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  122 bits (306), Expect = 8e-32
 Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 7/252 (2%)

Query: 276  ETLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR-RVIGKGLYEMPDRFFP 334
            E LE++   ++   L+   F  FYQPQ   D   +   EAL R R   +GL   P+ F P
Sbjct: 1018 ERLELES--DLRHALEQKEFTLFYQPQFSGDGKRLTGAEALLRWRHPRRGLVP-PNDFIP 1074

Query: 335  ILEKYHLIPTLTEVMVRDILTFLMT-EDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEE 393
            +LE+  L+  + + ++ +    L     A ++   + VNI  +  +DG   + +  + E+
Sbjct: 1075 VLEELGLVVEVGDWVLAEACRQLKHWHQARVRVPKVSVNISARQFSDGQLGKRIAHILEQ 1134

Query: 394  KQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPF 453
                 A   L +E+TE  L+ + + A   +  LK+LG+  A+DDFGTGYS   YL + P 
Sbjct: 1135 AGLSPAC--LELELTESILMREVNEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPI 1192

Query: 454  DVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQ 513
            DV+KID  ++  L   E    I +++I+   SL++ VIAE V++ +Q + L+E  CD VQ
Sbjct: 1193 DVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLEFLREHDCDEVQ 1252

Query: 514  GYLVSPAISPQQ 525
            GYL    + P Q
Sbjct: 1253 GYLFGRPMPPAQ 1264