Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1238 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  113 bits (283), Expect = 4e-29
 Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 298  FYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDI-LTF 356
            ++QPQ  + +  ++ FE L R    +     P  F PI E+  LI  +   ++R   LT 
Sbjct: 999  YFQPQVDLVTHRLLGFETLVRWNHPERGLVAPGEFIPIAEESDLIDAIGLWVMRAAGLTL 1058

Query: 357  LMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVEITEHDLIADF 416
                D      ++  NI  +     + +  L  V +E Q     H+L +E+TE  LI   
Sbjct: 1059 RRWIDHEGFTGSLSFNISARQFIRQNIFLKLFDVLQEFQIPP--HQLEIELTESSLIESP 1116

Query: 417  DAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVIL 476
            +     + + +S+G + ALDDFGTGYS   YL  +P + +KID  +I+ L        I+
Sbjct: 1117 ERFVQWLQEARSMGFQVALDDFGTGYSSLGYLKRLPINALKIDRSFIRDLPHDHDDQAIV 1176

Query: 477  QSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYLHNKLSP 536
            Q++++  K L ++ IAE V+  +Q   L+ +GCD VQG+   P +   + L +LH   SP
Sbjct: 1177 QAIVAMAKVLKLRTIAEGVERLEQAAFLEAIGCDAVQGFFYGPPLPEAEALAFLHRSASP 1236