Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 824 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (274), Expect = 3e-28
 Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 298 FYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDILTFL 357
           F QP   +D G +  FEAL R         MP  F P +E+   I  +   ++ + +  L
Sbjct: 570 FLQPIVSLDGGVIKGFEALVRWFHPSRGLIMPGSFIPHIEESDAIIRVGNYVLGEAVDML 629

Query: 358 MTEDAVLQ---DITIGVNIPGK-MLTDG--SFYRLLLSVAEEKQAQHALHRLSVEITEHD 411
             +   LQ   D+ I VN+  +  LT G   F R LL+ +           L +E+TE  
Sbjct: 630 --KRLRLQGWDDLYIAVNLSARHYLTPGLSDFIRKLLTASGIPPKC-----LLLEVTEES 682

Query: 412 LIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAES 471
           +I   D A   + +LK LG+R A+DDFGTGYS   YL ++PFDV+KID  +   + +  +
Sbjct: 683 VIEQVDKAMEVMRELKMLGVRIAIDDFGTGYSSLSYLKQLPFDVLKIDRCFTAGVLENGA 742

Query: 472 STVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYL 530
            T I+ ++I     L   V+AE ++++ Q + L+  GC+L QGYL S  I  ++ +  L
Sbjct: 743 DTHIVTTVIDLAHHLGRTVVAEGIETELQREFLEAAGCELAQGYLFSKPICEERAMEIL 801