Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 951 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  111 bits (278), Expect = 1e-28
 Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 6/232 (2%)

Query: 288 RDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTE 347
           R L+   F A++QPQ  + SG +   EALAR    +     P +F  + E+Y LI  +  
Sbjct: 699 RGLERHEFVAYFQPQVDLRSGLITGCEALARWNSPEDGLVPPGKFIGVAEEYGLIDAICG 758

Query: 348 VMVRDILTFLMTEDAV-LQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHAL--HRLS 404
            ++ D   +L T  A  L  + + VNI G+   +    R L+++ ++   Q  +    L 
Sbjct: 759 QVLDDSCRWLSTWRARGLPQVPVAVNISGRQFQNA---RQLVAMVDQALRQSGVDPRLLE 815

Query: 405 VEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQ 464
           +E+TE   ++D + A   +  L+  G+ CA+DDFGTGYS    L   P   +KID  ++ 
Sbjct: 816 LELTESSAMSDPENAIAVVNLLRERGVSCAIDDFGTGYSSLSVLKRFPIGKLKIDRSFVM 875

Query: 465 SLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYL 516
            +    +   I+Q++I+   +L+++V+AE V++      L+E+ CD VQG+L
Sbjct: 876 DVTTDPNDAAIVQAIIAMAHALNLRVVAEGVETLDHLAFLREVHCDAVQGFL 927