Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  116 bits (291), Expect = 3e-30
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 11/258 (4%)

Query: 285 NIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR-RVIGKGLYEMPDRFFPILEKYHLIP 343
           N+ + L        YQPQ  + SG +V  EAL R R   +GL   PDRF P+ E+  LI 
Sbjct: 704 NLRQALARQELALHYQPQYDLHSGTLVGCEALLRWRQPEQGLIP-PDRFIPVAEETGLIL 762

Query: 344 TLTEVMVRDILTFLMT-EDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHR 402
            + + ++R+        +DA L  + + VNI        +    L ++ +E  A   L  
Sbjct: 763 PIGQWVLREACRQAQAWQDAGLPPLVVAVNISAVQFRQAN----LAALVQEALAASGLSP 818

Query: 403 --LSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDG 460
             L +E+TE  L+ D +     + +LK++GIR ALDDFGTGYS   YL     D +KID 
Sbjct: 819 CWLELELTESMLMEDGERHTQTLAQLKAMGIRLALDDFGTGYSSLAYLKRFSLDKLKIDR 878

Query: 461 RYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPA 520
            +I+ L +      I  ++I   + L ++ +AE V+++QQ+  L E GC  +QG+L +  
Sbjct: 879 SFIRDLPQDAEDAAITTAIIGMARDLGLETLAEGVETEQQWSFLAERGCAQMQGFLRARP 938

Query: 521 ISPQQVLNYL--HNKLSP 536
           +   ++   L  H   +P
Sbjct: 939 MPADEITALLGRHGSATP 956