Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  113 bits (283), Expect = 3e-29
 Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 12/262 (4%)

Query: 276 ETLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPI 335
           E L ++Q L  ++ L+      +YQPQ  + SG VV  EAL R    +GL   P +F P+
Sbjct: 699 ERLTLQQRL--HQALERQELVLYYQPQLDLASGRVVGVEALLRWRTPEGLVP-PGKFIPL 755

Query: 336 LEKYHLIPTLTEVMVRDILTFLMTE-DAVLQDITIGVNIPGKMLTDGSFYR--LLLSVAE 392
            E+  LI  +   ++++      T  DA L  +T+ VN+         F+R  LL++V +
Sbjct: 756 AEETGLIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNLSALQ-----FHRDNLLITVGD 810

Query: 393 EKQAQHA-LHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEI 451
              A       L +E+TE  LI D +A    +  + ++G+  ++DDFGTGYS   YL   
Sbjct: 811 ALSAASLPAASLELELTESILIQDAEATLATLKAMNAMGVLLSIDDFGTGYSSLAYLKRF 870

Query: 452 PFDVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDL 511
             D +KID  +++ +     S  I+++++    SL ++ IAE V+++ Q   L+  GCD 
Sbjct: 871 TVDKLKIDQSFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGVETESQAAALRATGCDE 930

Query: 512 VQGYLVSPAISPQQVLNYLHNK 533
           VQGYL +  +   +   YL  K
Sbjct: 931 VQGYLYARPMPAAECEAYLRGK 952