Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., Signal transduction histidine kinase from Pseudomonas fluorescens FW300-N1B4

 Score =  146 bits (369), Expect = 1e-39
 Identities = 104/295 (35%), Positives = 154/295 (52%), Gaps = 30/295 (10%)

Query: 151 DELYALFDVTKSALYSMLQFRKTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSN 210
           D+  A F     AL   +  RK +  + Q+ Q EKLASLG+LAAGVAHEINNP+GF+ SN
Sbjct: 176 DQRTAQFKQASEALQREIDERKQL--ESQLVQSEKLASLGQLAAGVAHEINNPIGFISSN 233

Query: 211 FSFLNEYVAQIRQHPQIQPIAD------------PRLHEMIA------DSEAILMESLEG 252
              L+ Y  Q++        A+             +L E +       D   ++ ES EG
Sbjct: 234 LGALDGYFKQLQDMLDAYREAENAIGSSEVIEQLSQLRERVELDFLREDIPLLIKESKEG 293

Query: 253 LSRIKNIVSSLNVYSHTHENMAE--IDMRDVLSSALALIIGDLKYRAQFVYPAPEKPYYI 310
           + R+  IV  L  +S    N      ++   + S L ++  +LKY+A  V    + P  I
Sbjct: 294 IGRVGQIVKDLKDFSRVDSNQEWQWTNLHQGIESTLNIVANELKYKADVVKEFQQLPD-I 352

Query: 311 RGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEGIPRVQVLIEDNGKGISA 370
               +++ QV +NLI+NA Q++   + G + L     R   EG   V + + D G GI  
Sbjct: 353 ECLPSQINQVIMNLIVNASQAMGP-ERGTITL-----RTGLEG-ETVSIEVADTGIGIEP 405

Query: 371 EHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVFVTLP 425
           ++L+K+FDPF+TTK VG G GLGLS++  I+++H G I + S  GVG+   V LP
Sbjct: 406 DNLQKIFDPFYTTKPVGQGTGLGLSLSYGIVKKHQGDISVRSEVGVGSTFRVELP 460