Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  100 bits (249), Expect = 9e-26
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 20/250 (8%)

Query: 180 VQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPIADPRLHEMI 239
           ++  +K+ ++G+L  G+AH+ NN L  V+     +   VA  R                I
Sbjct: 184 LRHAQKMDAIGQLTGGIAHDFNNVLSGVIGALDMIRLRVAAGR----------------I 227

Query: 240 ADSEAILMESLEGLSRIKNIVSSLNVYSHTHE-NMAEIDMRDVLSSALALIIGDLKYRAQ 298
            +    L  +    +R   +   L  ++     N+  +D+  ++ S   L+ G +   A 
Sbjct: 228 GEVARYLDAAASSANRAAALTRRLLTFARRQSLNVTVVDVNCMVRSMEELLRGTVGAHAH 287

Query: 299 FVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEGI---P 355
                 E    +R   ++L+   +NL+INA  +V       VR     +    EG+    
Sbjct: 288 LEIELEEGLSAVRTDEHQLENALLNLVINARDAVPVGGRLCVRSRSLTLAAQKEGLLPGD 347

Query: 356 RVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGKIKLCSTEG 415
            +Q+ +EDNG GI+ + +++VFDPFFTTK VG G GLGLS+      +  G + + STEG
Sbjct: 348 YIQLSVEDNGCGIAQDVIDQVFDPFFTTKPVGQGTGLGLSMVYGFTRQSGGHVHIESTEG 407

Query: 416 VGTRVFVTLP 425
            GTRV + LP
Sbjct: 408 QGTRVHLQLP 417