Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1186 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (262), Expect = 8e-27
 Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 21/267 (7%)

Query: 177  KHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQH-PQIQPIADPRL 235
            + +  Q  +LAS+G+LAAG+AHEIN P+ ++  N  F+   + ++      ++ +A    
Sbjct: 918  QREALQASRLASVGQLAAGIAHEINTPIQYIGDNLRFIEGALGELGGVLADLRALAARGG 977

Query: 236  HEMIADS------EAILME--------SLEGLSRIKNIVSSLNVYSHTHENM-AEIDMRD 280
             E  AD        A LME        SL+G+  + +IV S+  +SH         D+  
Sbjct: 978  LEAEADGCFAAKDIAYLMEELPLAATQSLQGVDHVAHIVRSMKEFSHPGTTAKVATDINR 1037

Query: 281  VLSSALALIIGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQ-EGV 339
             + S L +   + K  AQ      +    I     ++ QV +NLI+NA  ++   + EG 
Sbjct: 1038 AIDSTLTVSRNEWKQLAQVETDLDDDLPLILCFAAEINQVLLNLIVNAAHAIETVRAEG- 1096

Query: 340  VRLELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVARE 399
             +L    +   GE    +++ I D+G G+     +K+FDPFFTTK VG G G GLS+ R+
Sbjct: 1097 -QLGTIRIATRGEA-ECIEIRITDSGPGVPPAIRDKIFDPFFTTKSVGKGTGQGLSICRD 1154

Query: 400  -IIEEHHGKIKLCSTEGVGTRVFVTLP 425
             ++ +H GK+ L ++   G    V LP
Sbjct: 1155 VVVTKHGGKMYLDTSVAPGACFVVRLP 1181