Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 2e-29
 Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 27/246 (10%)

Query: 177 KHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPIADPRLH 236
           + Q+   EKL +LG+L AG+AHEINNP   ++ N   L                    L 
Sbjct: 456 RQQLVTNEKLTALGELTAGIAHEINNPTAVILGNMELLKS-----------------ELG 498

Query: 237 EMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAEIDMRD---VLSSALALIIGDL 293
           +   D E  +   +E + RI  I+ SL  YS   E  A ++M     ++     L+   +
Sbjct: 499 DKAEDVEEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEEMAILVRHSI 558

Query: 294 KYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEG 353
           K +   +       Y I  +  +L QV INL++NA  ++    +G  R+ +    W   G
Sbjct: 559 KKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAM----DGQGRIWIRTYDWVQGG 614

Query: 354 IP-RVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGKIKLCS 412
            P  V++ +ED GKGI  E L ++FDPF+TT++  DG GLGLS++  II+   G I++ S
Sbjct: 615 EPIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQ--DGTGLGLSLSYGIIKRIGGTIEVSS 672

Query: 413 TEGVGT 418
           T G GT
Sbjct: 673 TVGKGT 678