Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  122 bits (307), Expect = 2e-32
 Identities = 94/282 (33%), Positives = 149/282 (52%), Gaps = 30/282 (10%)

Query: 161 KSALYSMLQFRKTVIDKH-QVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYV- 218
           +  L S+ Q  + +   H Q+   EKLA++G+LAAGVAHEIN PLG++ SN   +  ++ 
Sbjct: 139 QDTLTSLEQTNRRLTQTHDQLLHAEKLAAIGQLAAGVAHEINTPLGYIQSNLGAMARHLE 198

Query: 219 -----------AQIRQHPQIQPIADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYS 267
                      A   Q P  +   D  L  +  D+  +L E+ +G+SR+  +V  L  +S
Sbjct: 199 DLLTLVDAYESAAAGQQPPGRERID--LDFLRQDAPQVLAETRQGISRVSTVVRHLLEFS 256

Query: 268 HTHEN--MAEIDMRDVLSSALALIIGDL-KYRAQFVYPAPEKPYYIRGSYNKLQQVFINL 324
            T  +    + D+  +  +A          +R +  Y A    + +     +LQQ   NL
Sbjct: 257 STCASGEWRQADLEAICRTAAERACQKRHNFRLEQRYDALPPLHCLP---ERLQQALENL 313

Query: 325 IINAVQSVSATQEGVVRLE-LCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTT 383
           I NA+ ++ A  EG+VRL   C      +G  ++ + +EDNG GI+ +HLE +F+PFFTT
Sbjct: 314 IDNALLAIPA--EGMVRLHGSCP-----DG-RQICLTVEDNGCGIAPQHLESIFNPFFTT 365

Query: 384 KKVGDGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVFVTLP 425
           + VG G G+GLSVA  +   H G I++ S+ G+G+R  + LP
Sbjct: 366 RPVGSGEGMGLSVADTVARLHGGNIEVESSPGLGSRFTLHLP 407