Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

 Score =  105 bits (261), Expect = 6e-27
 Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 30/251 (11%)

Query: 177 KHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPIADPRLH 236
           + Q+   EKL ++G+L AGVAHEINNP+  +  N   L + + +     Q +P+      
Sbjct: 450 QQQLVMNEKLTAIGELTAGVAHEINNPVAVIQGNLELLRDVLGE-----QAEPVR----- 499

Query: 237 EMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHE--NMAE-IDMRDVLSSALALIIGDL 293
                 E  L++  E   RI+ IV+ L  ++   +    AE  D+  V++  L L   +L
Sbjct: 500 -----GEIRLID--EQTQRIRAIVTRLLQFARPGDFAGYAEATDVNGVVADCLVLTRHNL 552

Query: 294 KYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEG 353
                 V    E    +  +  +LQQV INL++NA+Q++   Q G + +E  ++  PG+ 
Sbjct: 553 NKAGVKVETRLEACCNVEMNRGELQQVLINLMMNAMQAM--PQGGTLSMESRDI-GPGDA 609

Query: 354 I------PRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGK 407
           I      P   + + D G GI+   L+++FDPFFTTKK  +G GLGLS++  II+ + G+
Sbjct: 610 IPGEASFPGALLRVRDTGHGIAPADLDRIFDPFFTTKK-QEGTGLGLSISYAIIQRYGGR 668

Query: 408 IKLCSTEGVGT 418
           I + S  G  T
Sbjct: 669 ISVESAPGEHT 679