Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  142 bits (359), Expect = 4e-38
 Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 29/271 (10%)

Query: 179 QVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQI---------------RQ 223
           Q+ Q EK+AS+G+LAAGVAHE+NNP+GFV SN   L+ Y+ +I               R 
Sbjct: 738 QLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYLREIFAIIAAYEAADSGPCRD 797

Query: 224 HPQIQPIADPRLHE----MIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAE-IDM 278
             Q++     +L +    + +D   +L ES +GL R+  I   L  +S   E  ++  D+
Sbjct: 798 CRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKIARDLKDFSRAGEAESQWADL 857

Query: 279 RDVLSSALALIIGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEG 338
              L S L ++  +LKY+        E P  +    +++ QVF+NL++NA Q++   ++G
Sbjct: 858 HQGLDSTLNIVWNELKYKCTVHKEYGELPL-VWCEPSQINQVFMNLLVNAAQAIP--KKG 914

Query: 339 VVRLELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAR 398
            + L        G     V V + D+G GI+ E+L ++F+PFFTTK VG G GLGLS+A 
Sbjct: 915 DIWLRT------GRRGDEVFVAVSDSGCGIAPEYLHRLFEPFFTTKPVGKGTGLGLSLAY 968

Query: 399 EIIEEHHGKIKLCSTEGVGTRVFVTLPQAVR 429
            I+++H G++++ S  G G+   V LP   R
Sbjct: 969 SIVQKHQGRLEVESEPGRGSTFTVWLPIEAR 999