Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  166 bits (419), Expect = 3e-45
 Identities = 103/280 (36%), Positives = 159/280 (56%), Gaps = 30/280 (10%)

Query: 177 KHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEY--------------VAQI- 221
           + Q+ Q EK+AS+G+LAAGVAHEINNP+G+V SN S L  Y              VAQ+ 
Sbjct: 462 QEQLVQSEKMASIGQLAAGVAHEINNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLP 521

Query: 222 RQHPQIQPIA----DPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYSH--THENMAE 275
            +HP  Q +A    D     ++ D  +++ +S +G+ R++ IV+ L  +S     ++   
Sbjct: 522 SEHPAAQAVARVKQDLDFDFLLEDLPSLVTQSRDGIDRVRKIVADLKDFSRLDASQDWQW 581

Query: 276 IDMRDVLSSALALIIGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSAT 335
            D+   L S L ++  ++KYRA+ V    + P  +    ++L QVF+NL++N+  ++   
Sbjct: 582 ADLHQGLDSTLNIVNNEIKYRAEVVREYGQLPE-VECLPSQLNQVFLNLLVNSAHAMPEG 640

Query: 336 QEGVVRLELCEVRWPGEGIPRVQVL--IEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLG 393
           Q G + L        G   P  QV   +EDNG GIS E++ ++FDPFFTTK VG G GLG
Sbjct: 641 QMGRITLR------SGHDEPAHQVWLEVEDNGSGISPENMHRLFDPFFTTKPVGKGTGLG 694

Query: 394 LSVAREIIEEHHGKIKLCSTEGVGTRVFVTLPQAVRAQGA 433
           LS++  I+++HHG+I + S  G GT   + LP +   +GA
Sbjct: 695 LSLSYGIVQKHHGQITVSSELGKGTTFRIVLPVSQPKEGA 734