Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  135 bits (341), Expect = 2e-36
 Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 33/284 (11%)

Query: 169 QFRKTVIDKHQVQQE----EKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQH 224
           + R+T  D  + QQ+    EK+ASLG+L AGVAHE+NNP+ FV+ N   L  Y  ++  +
Sbjct: 184 ELRQTHEDLKRTQQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKRYAGRLETY 243

Query: 225 ------------PQIQPI-ADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHE 271
                       P+++ + ++ R+  ++ D   ++   +EG  R ++IV  L  +S    
Sbjct: 244 LEAVHNRGCDCIPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRFSALDR 303

Query: 272 NMAE-IDMRDVLSSALALIIGDL--KYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINA 328
             AE  ++ +V+  A+  +       +  +   PA E P  +RGS  +LQQV +NL+ NA
Sbjct: 304 EAAERFNLAEVVQRAVRWVAKSAPPSFTVRTELPA-ELP--LRGSPGQLQQVVMNLVQNA 360

Query: 329 VQSVSATQEGVVRLELCEVRWPGE-GIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVG 387
           +Q+ +A   G       E+   GE G   ++++  DNG GI  E L  +FDPFFTTK VG
Sbjct: 361 LQATAAQPGG-------ELLISGELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVG 413

Query: 388 DGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVF-VTLPQAVRA 430
           +G GLGLS++  I+E H G+I + S    G  VF +TLP+ + A
Sbjct: 414 EGTGLGLSISYGIVERHGGRI-VASNHPEGGAVFRLTLPRDLPA 456