Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., multi-sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  107 bits (267), Expect = 1e-27
 Identities = 130/438 (29%), Positives = 187/438 (42%), Gaps = 78/438 (17%)

Query: 24  ALLAFIKVLFSNVKPKRKFDSLMTTISDLVPGCQIALLERQSDEHWRIIQTSGLTVETRF 83
           AL A I  L    +   +   +M TI ++ P  ++ALL    DEH R +  +    ++  
Sbjct: 294 ALRAHIAELRETERDLTRQQGIMRTILEVTPD-RLALL----DEHLRYLSVNKAFADS-- 346

Query: 84  KTALPPFIEDEWYCMPNVQAEMVWREHYAHCFPDCQSALAAKFHTAENHYLLLIMQPML- 142
              L P             AE++ +  +   FP  +    A+   AEN  +L   QP+  
Sbjct: 347 -LGLSP-------------AEIIGKSDF-DIFPRDK----AELRVAENRAILTGGQPVYR 387

Query: 143 ------------------DGFNHSQRDELYALFDVTKS----ALYSMLQFRK--TVIDKH 178
                               F H  RDE + L  V  S     +  +L   +  T I  +
Sbjct: 388 EAQDRRDAASAAGGSDAPSDFGHG-RDEWFHLVKVPVSDETGRIIGVLSTARDITAIRSY 446

Query: 179 QVQ--QEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPIADPRLH 236
           Q Q  Q +K+ S+GKLA GVAHEIN PLG ++     L E V      P  Q   D ++ 
Sbjct: 447 QDQLIQSQKMESVGKLAGGVAHEINTPLGIILGYAQLLQEDVP-----PGAQMHQDLQII 501

Query: 237 EMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAEIDMRDVLSSALALIIGDLKYR 296
           E  A     ++  L G SR          ++++   +  + +R   S     I+ DL  R
Sbjct: 502 EKQAKFCRKIVSDLLGFSRQTQSQKKEMCFNNSIMEVVTL-VRHTFSLENVTILADLDDR 560

Query: 297 AQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEGIPR 356
              +Y APEK          L+QV++NL+ NA  ++       VR  L  +         
Sbjct: 561 LPVIYGAPEK----------LKQVWMNLLHNATGAMLGGGLIKVRTRLDIMNMT------ 604

Query: 357 VQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGKIKLCSTEGV 416
           V     D G GI   HL+K+FDPFF+TK VG G GLGLSV+  IIE+H G I+  S    
Sbjct: 605 VTAWFADTGIGIPEPHLQKIFDPFFSTKPVGKGTGLGLSVSFGIIEDHEGFIEAHSPLPP 664

Query: 417 GTRVFVTLPQ-AVRAQGA 433
           G  +   +PQ A R  GA
Sbjct: 665 GF-IDEDMPQGATRGPGA 681