Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  106 bits (265), Expect = 2e-27
 Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 21/260 (8%)

Query: 171 RKTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPI 230
           R+ ++D   + Q  K+A+LGKLAAGVAHE+NNPL  +  N  ++ + +++          
Sbjct: 312 RQAMLDA-SLMQSSKMAALGKLAAGVAHEVNNPLMLIRENAGWIRDLLSE---------- 360

Query: 231 ADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAE-IDMRDVLSSALALI 289
            D       A+ E   ++  + + R K I   +  +    E M E + +  +    +  +
Sbjct: 361 EDAARMGHHAEIEEAAVKIEQHVDRAKGITHRMLGFGRRMEPMQEDVPLNVLTEQTVKFL 420

Query: 290 IGDLKYRAQFVYPA--PEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEV 347
             +  +R+  ++     E P  I     ++QQV +N++ NA+ +V       VR    E 
Sbjct: 421 ESEALHRSITIHKDFDAELPA-ITTDTAQVQQVILNVLDNAIDAVGQGGSITVRTGATE- 478

Query: 348 RWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGK 407
                G   V V + D G GI+ E LE +FDPF+TTKK G+G GLGL++   I+E+  G+
Sbjct: 479 -----GGQEVFVAVTDTGGGIAPEVLEHIFDPFYTTKKAGEGTGLGLAICYSIMEKLGGR 533

Query: 408 IKLCSTEGVGTRVFVTLPQA 427
           I   ST G G    V LP A
Sbjct: 534 IVAESTPGNGATFTVYLPTA 553