Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  148 bits (373), Expect = 6e-40
 Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 29/274 (10%)

Query: 166 LIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTA 225
           ++QSEKM S+G L+AG+AHEINNP+G I  N+Q      N   ++   + + I Q++   
Sbjct: 404 MVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQ------NIRRRLSPELPKNIEQAEADG 457

Query: 226 LNEACQKILKQGQVDFILE--DTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANL 283
           ++ A        QV+  LE  +  +L+    +  +R   IV ++  FS +   + S  +L
Sbjct: 458 IDLA--------QVNHYLESREVPKLLDGIQQAGARAAKIVSHMLNFSRLSSRQLSPCDL 509

Query: 284 ENCIESTLKIINNEIKYNITLE-------KHYAANVPDVFCQPMQINQVLLNILVNASHA 336
              I+  ++I +N+    I  +       + +   +  V C   ++ QVLLN+L NA+ A
Sbjct: 510 PALIDQAVEIASNDFDLTIGFDFKGQHIIRQFDPELGPVPCIANELEQVLLNLLKNAAQA 569

Query: 337 I----KGEGTITITLQSA-GDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLG 391
           I    + E    ITL++     + EI + D G G+ E IR+R FEPFFTTK +G GTGLG
Sbjct: 570 IHQRPESEEPGRITLRTRLNPPWAEIQVEDNGIGMSESIRKRTFEPFFTTKEIGQGTGLG 629

Query: 392 LSVSYGII-NKHNGTISVTSEVGKGSEFTIRLPV 424
           LSVSY I+ N H G + V S +G G+ FT+RLP+
Sbjct: 630 LSVSYFIVTNNHKGQMEVHSSLGTGTCFTLRLPL 663