Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  118 bits (296), Expect = 5e-31
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 65/301 (21%)

Query: 141 VSQKLEEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTL 200
           VS++L E+        ++L  A+  L QS+KM ++GQL+ GIAH+ NN +  IT +L+ L
Sbjct: 247 VSERLREQ--------ERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELL 298

Query: 201 SDY-----FNSLEKVLKSITQTIGQSKDTALNEACQKILKQGQVDFILEDTAELITESLE 255
                   FN L++ L       G ++D                                
Sbjct: 299 KTRVSQGRFNELDRYL-------GAAQDA------------------------------- 320

Query: 256 GSSRVMSIVKNLKEFSHVDRSEWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDV 315
            S R  S+   L  FS     +    ++   +    ++I   +  +ITLE   +  +   
Sbjct: 321 -SKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRRTVGPHITLEVVTSVGLWST 379

Query: 316 FCQPMQINQVLLNILVNASHAIKGEGTITITLQ--------SAGDD-----FVEIHIRDT 362
           F    Q+   LLN+ +NA  A+   G ITI           S G D     ++ + + DT
Sbjct: 380 FIDAPQLENALLNLCINARDAMPRGGRITIETANRWIDERGSQGRDLIPGQYLSLCVSDT 439

Query: 363 GCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRL 422
           G G+  E+  R+F+PFFTTKP+G GTGLGLS+ YG + +  G + + SE G+G+   + L
Sbjct: 440 GTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSGGQVRIYSEPGQGTNMCLYL 499

Query: 423 P 423
           P
Sbjct: 500 P 500