Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (325), Expect = 2e-34
 Identities = 85/325 (26%), Positives = 156/325 (48%), Gaps = 51/325 (15%)

Query: 113 SEDGTIEHVCLCVYDVTIQASQQQELKRVSQKLEEEHQSQKVLIKKLEDAQGQLIQSEKM 172
           S++G +  +     D+T +   + +L+R+++ LE++ + +   ++  E+    L QS+KM
Sbjct: 247 SKNGMVGSLAGVTSDITERKQAESQLRRLNETLEQQVEERTSQLRHKEEI---LRQSQKM 303

Query: 173 ASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTALNEACQK 232
            ++GQL+ GIAH+ NN +  I  +L+ +                              ++
Sbjct: 304 EAVGQLTGGIAHDFNNMLTGIIGSLELI------------------------------RR 333

Query: 233 ILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANLENCIESTLK 292
            L +G+     ED   LI   +  ++R  ++   L  FS     +     + + + +  +
Sbjct: 334 RLARGRT----EDLNSLIDLGVTSANRAAALTHRLLAFSRRQSLDSKPVEMNHLVNAMDE 389

Query: 293 IINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTITI-TLQSAG 351
           ++   +  +I L+   A ++      P Q+   LLN+++NA  A+   GT+ + T     
Sbjct: 390 LLQRSVNESIHLQLRLAHDLWTAEADPNQLESALLNLVLNARDAMPDGGTLVVETFNQQL 449

Query: 352 D-------------DFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGI 398
           D             D+V + + D GCG+PE +  R F+PFFTTKP+G GTGLGLS+ YG 
Sbjct: 450 DRSFTNAHENLLPGDYVVLSVSDNGCGMPETVISRAFDPFFTTKPIGQGTGLGLSMIYGF 509

Query: 399 INKHNGTISVTSEVGKGSEFTIRLP 423
             + +G + + SEVG G+   + LP
Sbjct: 510 SKQSHGHVLIKSEVGVGTTVQLFLP 534