Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (364), Expect = 7e-39
 Identities = 104/300 (34%), Positives = 160/300 (53%), Gaps = 47/300 (15%)

Query: 132 ASQQQELK--RVSQKLEEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNP 189
           A++Q ELK    ++ L+E+ +  +  +  L + + QL+ +EK+ ++G+L+AGIAHEINNP
Sbjct: 423 AAEQLELKVEERTRSLQEKTEELQRNVSLLNETRAQLVTNEKLTALGELTAGIAHEINNP 482

Query: 190 VGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTALNEACQKILKQGQVDFILEDTAEL 249
              I  N++ L                                  K GQV    E+  +L
Sbjct: 483 TAVILGNMELLRSELGD----------------------------KAGQV----EEEIDL 510

Query: 250 ITESLEGSSRVMSIVKNLKEFSHVDR--SEWSYANLENCIESTLKIINNEIK-YNITLEK 306
           + + +    R+ +I+++L ++S      +      +   IE  L ++ + IK   + L +
Sbjct: 511 VIQQV---GRISTIIRSLLQYSRPGEFNAPLEMHQITPIIEEMLVLVRHSIKKQEVVLHQ 567

Query: 307 HYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTITI-TLQSAGDDF---VEIHIRDT 362
              A+ P    +P Q+ QVL+N++VNA+HA+ G+G I I T      D    V+I I D 
Sbjct: 568 ELNASCPVQINRP-QLLQVLINLVVNAAHAMDGKGRIWIRTYDWVVQDEPVGVKIEIEDE 626

Query: 363 GCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRL 422
           GCGI  E   RIF+PF+TT+P   GTGLGLS+SYGII +  GTI VTS +GKG+ FTI L
Sbjct: 627 GCGIAPEQLGRIFDPFYTTRP--DGTGLGLSLSYGIIKRIGGTIEVTSTLGKGTLFTIGL 684