Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1186 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  179 bits (454), Expect = 4e-49
 Identities = 102/275 (37%), Positives = 162/275 (58%), Gaps = 9/275 (3%)

Query: 156  IKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSIT 215
            I  L++AQ + +Q+ ++AS+GQL+AGIAHEIN P+ +I  NL+ +      L  VL  + 
Sbjct: 911  IDALKEAQREALQASRLASVGQLAAGIAHEINTPIQYIGDNLRFIEGALGELGGVLADLR 970

Query: 216  QTIGQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDR 275
                +    A  + C        + +++E+     T+SL+G   V  IV+++KEFSH   
Sbjct: 971  ALAARGGLEAEADGC---FAAKDIAYLMEELPLAATQSLQGVDHVAHIVRSMKEFSHPGT 1027

Query: 276  SEWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLNILVNASH 335
            +     ++   I+STL +  NE K    +E     ++P + C   +INQVLLN++VNA+H
Sbjct: 1028 TAKVATDINRAIDSTLTVSRNEWKQLAQVETDLDDDLPLILCFAAEINQVLLNLIVNAAH 1087

Query: 336  AI---KGEGTI-TITLQSAGD-DFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGL 390
            AI   + EG + TI + + G+ + +EI I D+G G+P  IR++IF+PFFTTK VG GTG 
Sbjct: 1088 AIETVRAEGQLGTIRIATRGEAECIEIRITDSGPGVPPAIRDKIFDPFFTTKSVGKGTGQ 1147

Query: 391  GLSVSYG-IINKHNGTISVTSEVGKGSEFTIRLPV 424
            GLS+    ++ KH G + + + V  G+ F +RLP+
Sbjct: 1148 GLSICRDVVVTKHGGKMYLDTSVAPGACFVVRLPI 1182