Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  138 bits (347), Expect = 6e-37
 Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 48/303 (15%)

Query: 130 IQASQQQELKRVSQK---LEEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEI 186
           IQA+ +Q   +V ++   L+E+ +  +  +  L + + QL+ +EK+ ++G+L+AGIAHEI
Sbjct: 420 IQAAAEQLEVKVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEI 479

Query: 187 NNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTALNEACQKILKQGQVDFILEDT 246
           NNP   I  N++ L                      D A                  ED 
Sbjct: 480 NNPTAVILGNMELLKSELG-----------------DKA------------------EDV 504

Query: 247 AELITESLEGSSRVMSIVKNLKEFSHVDR--SEWSYANLENCIESTLKIINNEIK-YNIT 303
            E I   +E   R+ +I+++L ++S      +      L   +E    ++ + IK   + 
Sbjct: 505 EEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIVEEMAILVRHSIKKQEVV 564

Query: 304 LEKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTITIT----LQSAGDDFVEIHI 359
           L +   A+ P    +P Q+ QVL+N++VNA+HA+ G+G I I     +Q      V+I +
Sbjct: 565 LIQDLNASYPIEVNRP-QLLQVLINLVVNAAHAMDGQGRIWIRTYDWVQGGEPIGVKIEV 623

Query: 360 RDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFT 419
            D G GIPEE   RIF+PF+TT+    GTGLGLS+SYGII +  GTI V+S VGKG+ FT
Sbjct: 624 EDEGKGIPEEQLGRIFDPFYTTRQ--DGTGLGLSLSYGIIKRIGGTIEVSSTVGKGTLFT 681

Query: 420 IRL 422
           I L
Sbjct: 682 IGL 684