Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  171 bits (432), Expect = 5e-47
 Identities = 112/351 (31%), Positives = 183/351 (52%), Gaps = 24/351 (6%)

Query: 94  PVSGEEEQMYQNLEVIPIHSEDGTIEHVC----LCVYDVTIQA----SQQQELKRVSQKL 145
           P++GE E  +Q+   + +  +   I   C    +   D T+ A    +   E +R  + L
Sbjct: 81  PLAGEAE--FQHRRQVFLQRDGSPIVVECNQALILEEDQTVGAVLMFNDISERERAERAL 138

Query: 146 EEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFN 205
           ++   S +   ++L     QL+ +EK+A+IGQL+AG+AHEIN P+G+I SNL  ++ +  
Sbjct: 139 QDTLTSLEQTNRRLTQTHDQLLHAEKLAAIGQLAAGVAHEINTPLGYIQSNLGAMARHLE 198

Query: 206 SLEKVLKSITQTIGQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVK 265
            L  ++ +        +                +DF+ +D  +++ E+ +G SRV ++V+
Sbjct: 199 DLLTLVDAYESAAAGQQPPGRERI--------DLDFLRQDAPQVLAETRQGISRVSTVVR 250

Query: 266 NLKEFSHVDRS-EWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQ 324
           +L EFS    S EW  A+LE    +  +    + ++N  LE+ Y A +P + C P ++ Q
Sbjct: 251 HLLEFSSTCASGEWRQADLEAICRTAAERACQK-RHNFRLEQRYDA-LPPLHCLPERLQQ 308

Query: 325 VLLNILVNASHAIKGEGTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPV 384
            L N++ NA  AI  EG + +         + + + D GCGI  +  E IF PFFTT+PV
Sbjct: 309 ALENLIDNALLAIPAEGMVRLHGSCPDGRQICLTVEDNGCGIAPQHLESIFNPFFTTRPV 368

Query: 385 GSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRLPVN---PSAEAVD 432
           GSG G+GLSV+  +   H G I V S  G GS FT+ LP+    P A+A +
Sbjct: 369 GSGEGMGLSVADTVARLHGGNIEVESSPGLGSRFTLHLPLQNNLPQAKAAE 419